complex_transcript_variant
SO:0001577
Definition: A transcript variant with a complex INDEL- Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.
Comments and references
EBI term: Complex InDel - Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.
Definition references: http://ensembl.org/info/docs/variation/index.html
Synonyms
| Scope | Value |
|---|---|
| exact | complex change in transcript |
| exact | complex transcript variant |
| exact | complex_indel |
| related | Seattleseq:codingComplex |
| related | Seattleseq:codingComplex-near-splice |
Identifiers and subsets
Accession: SO:0001577
Persistent URL: http://purl.obolibrary.org/obo/SO_0001577
Alternate IDs: None
Subsets: None
Cross references: http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2016-12-05 in commit 92e3cae
Number of changes: 1
Ontology neighborhood diagram
Relationships
Parents
Children
None recorded in the current release neighborhood.
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: complex_transcript_variant Initial definition captured. Initial parent: SO:0001576 | 92e3cae |