YR_retrotransposon (CURRENT_SVN) |
|
|---|---|
| SO Accession: | SO:0002286 (SOWiki) |
| Definition: | Tyrosine Kinase (YR) retrotransposons are a subclass of non-LTR retrotransposons. These YR-encoding elements consist of central gag, pol and tyrosine recombinase (YR) open reading frames (ORFs) flanked with terminal repeat. The pol ORF includes a reverse transcriptase (RT), a RNase H (RH) and, in case of DIRS, a domain similar to bacterial and phage DNA N-6-adenine-methyltransferase (MT). Compared to the retroviral pol (LTR retrotransposons, non-LTR retrotransposons and Penelope elements), both aspartic protease and DDE integrase are absent from YR retrotransposons. YR retrotransposons have inverted terminal repeats (ITRs). |
| Synonyms: | tyrosine kinase retrotransposon, YR retrotransposon |
| DB Xrefs: | PMID: 24086727 |
| Parent: | non_LTR_retrotransposon (SO:0000189) |
| Children: | Ngaro_YR_retrotransposon (SO:0002288) |
| DIRS_YR_retrotransposon (SO:0002287) | |
| Viper_YR_retrotransposon (SO:0002289) | |
In the image below graph nodes link to the appropriate terms. Clicking the image background will toggle the image between large and small formats.
