NMD_triggering_variant (CURRENT_SVN) |
|
|---|---|
| SO Accession: | SO:0002319 (SOWiki) |
| Definition: | A sequence variant that leads to a change in the location of a termination codon in a transcript that leads to nonsense-mediated decay (NMD). The change in location of a termination codon can be caused by several different types of sequence variants, including stop_gained (SO:0001587), frameshift_variant (SO:0001589), splice_donor_variant (SO:0001575), and splice_acceptor_variant (SO:0001574) types of variants. |
| Synonyms: | NMD triggering variant, nonsense-mediated decay triggering variant |
| DB Xrefs: | GenCC: AR |
| Parent: | functionally_abnormal (SO:0002218) |
| Children: | stop_gained_NMD_triggering (SO:0002321) |
| splice_acceptor_variant_NMD_triggering (SO:0002327) | |
| splice_donor_variant_NMD_triggering (SO:0002325) | |
| frameshift_variant_NMD_triggering (SO:0002323) | |
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