SO:0001792 - non_coding_transcript_exon

non_coding_transcript_exon_variant

SO:0001792

Definition: A sequence variant that changes non-coding exon sequence in a non-coding transcript.

Comments and references

Definition references: EBI:fc, SO:ke

Synonyms

Scope	Value
exact	Seattleseq:non-coding-exon
exact	VEP:non_coding_transcript_exon_variant
exact	non coding transcript exon variant
exact	non_coding_transcript_exon_variant
exact	snpEff:non_coding_exon_variant
related	Seattleseq:non-coding-exon-near-splice
narrow	ANNOVAR:ncRNA_exonic
narrow	Jannovar:non_coding_transcript_exon_variant

Identifiers and subsets

Accession: SO:0001792

Persistent URL: http://purl.obolibrary.org/obo/SO_0001792

Alternate IDs: None

Subsets: None

Cross references: http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-09-13 in commit d6d59cd

Number of changes: 2

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2018-09-13	synonym added	Synonym added: snpEff:non_coding_exon_variant Scope: related	`d6d59cd`
2016-12-05	created	Term introduced into the editable ontology history Initial label: non_coding_transcript_exon_variant Initial definition captured. Initial parents: SO:0001619, SO:0001791	`92e3cae`