Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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transposable_element

SO:0000101

Definition: A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.

Comments and references

Definition references: http://www.sci.sdsu.edu/~smaloy/Glossary/T.html

Synonyms

ScopeValue
exacttransposable element
exacttransposon

Identifiers and subsets

Accession: SO:0000101

Persistent URL: http://purl.obolibrary.org/obo/SO_0000101

Alternate IDs: None

Subsets: SOFA

Cross references: http://en.wikipedia.org/wiki/Transposable_element

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000101 Ontology neighborhood graph for SO:0000101 transposable_element. Parent, child, and related nodes can be activated to open their term pages. SO:0001039 integrated_mobile_genetic_element SO:0001039 integrated_mobile_genetic_element SO:0000101 transposable_element SO:0000101 transposable_element SO:0001648 nested_transposon SO:0001648 nested_transposon SO:0000720 foreign_transposable_element SO:0000720 foreign_transposable_element SO:0000182 DNA_transposon SO:0000182 DNA_transposon SO:0000180 retrotransposon SO:0000180 retrotransposon SO:0000798 engineered_transposable_element SO:0000798 engineered_transposable_element SO:0000796 transgenic_transposable_element SO:0000796 transgenic_transposable_element SO:0001897 transposable_element_pseudogene SO:0001897 transposable_element_pseudogene SO:0001896 transposable_element_CDS SO:0001896 transposable_element_CDS SO:0000111 transposable_element_gene SO:0000111 transposable_element_gene SO:0000434 target_site_duplication SO:0000434 target_site_duplication
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#derives_from (incoming)

http://purl.obolibrary.org/obo/so#part_of (incoming)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: transposable_element
Initial definition captured.
Initial parent: SO:0001039
92e3cae