nuclease_hypersensitive_site

SO:0000322

Definition: A region of nucleotide sequence targeted by a nuclease enzyme that is found cleaved more than would be expected by chance.

Comments and references

Relationship to accessible_DNA_region added 11 Feb 2021. GREEKC pointed out that this is an assay based term, but we need a biological term for the accessible DNA. See GitHub Issue #531.

Synonyms

ScopeValue
exactnuclease hypersensitive site

Identifiers and subsets

Accession: SO:0000322

Persistent URL: http://purl.obolibrary.org/obo/SO_0000322

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2021-02-11 in commit 14b0f04

Number of changes: 3

Ontology neighborhood diagram

Ontology neighborhood for SO:0000322 Ontology neighborhood graph for SO:0000322 nuclease_hypersensitive_site. Parent, child, and related nodes can be activated to open their term pages. SO:0002331 accessible_DNA_region SO:0002331 accessible_DNA_region SO:0000684 nuclease_sensitive_site SO:0000684 nuclease_sensitive_site SO:0000322 nuclease_hypersensitive_site SO:0000322 nuclease_hypersensitive_site SO:0000685 DNaseI_hypersensitive_site SO:0000685 DNaseI_hypersensitive_site
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2021-02-11parent addedParent added: SO:000233114b0f04
#531
2020-03-27definition changedDefinition updated
Before: no definition recorded
After: A region of nucleotide sequence targeted by a nuclease enzyme that is found cleaved more than would be expected by chance.
3ec5d33
2016-12-05createdTerm introduced into the editable ontology history
Initial label: nuclease_hypersensitive_site
Initial parent: SO:0000684
92e3cae