STS

SO:0000331

Definition: Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.

Comments and references

Definition references: http://www.biospace.com

Synonyms

ScopeValue
exactINSDC_feature:STS
exactsequence tag site

Identifiers and subsets

Accession: SO:0000331

Persistent URL: http://purl.obolibrary.org/obo/SO_0000331

Alternate IDs: None

Subsets: SOFA

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 2

Ontology neighborhood diagram

Ontology neighborhood for SO:0000331 Ontology neighborhood graph for SO:0000331 STS. Parent, child, and related nodes can be activated to open their term pages. SO:0000324 tag SO:0000324 tag SO:0000331 STS SO:0000331 STS SO:0001252 RH_map SO:0001252 RH_map SO:0001251 STS_map SO:0001251 STS_map
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

http://purl.obolibrary.org/obo/so#has_part (incoming)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym addedSynonym added: INSDC_feature:STS
Scope: exact
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: STS
Initial definition captured.
Initial parent: SO:0000324
92e3cae