Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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RNApol_III_promoter_type_3

SO:0000621

Definition: This type of promoter recruits RNA pol III to transcribe predominantly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream.

Comments and references

Definition references: PMID:12381659

Synonyms

ScopeValue
exactRNApol III promoter type 3

Identifiers and subsets

Accession: SO:0000621

Persistent URL: http://purl.obolibrary.org/obo/SO_0000621

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2020-03-27 in commit 3ec5d33

Number of changes: 2

Ontology neighborhood diagram

Ontology neighborhood for SO:0000621 Ontology neighborhood graph for SO:0000621 RNApol_III_promoter_type_3. Parent, child, and related nodes can be activated to open their term pages. SO:0000171 RNApol_III_promoter SO:0000171 RNApol_III_promoter SO:0000621 RNApol_III_promoter_type_3 SO:0000621 RNApol_III_promoter_type_3
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2020-03-27definition changedDefinition updated
Before: no definition recorded
After: This type of promoter recruits RNA pol III to transcribe predominantly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream.
3ec5d33
2016-12-05createdTerm introduced into the editable ontology history
Initial label: RNApol_III_promoter_type_3
Initial parent: SO:0000171
92e3cae