reading_frame

SO:0000717

Definition: A nucleic acid sequence that when read as sequential triplets, has the potential of encoding a sequential string of amino acids. It need not contain the start or stop codon.

Comments and references

This term was added after a request by SGD. August 2004. Modified after SO meeting in Cambridge to not include start or stop.

Definition references: SGD:rb

Synonyms

ScopeValue
exactreading frame

Identifiers and subsets

Accession: SO:0000717

Persistent URL: http://purl.obolibrary.org/obo/SO_0000717

Alternate IDs: None

Subsets: SOFA

Cross references: http://en.wikipedia.org/wiki/Reading_frame

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000717 Ontology neighborhood graph for SO:0000717 reading_frame. Parent, child, and related nodes can be activated to open their term pages. SO:0001410 experimental_feature SO:0001410 experimental_feature SO:0000717 reading_frame SO:0000717 reading_frame SO:0000236 ORF SO:0000236 ORF SO:0002048 disabled_reading_frame SO:0002048 disabled_reading_frame SO:0000718 blocked_reading_frame SO:0000718 blocked_reading_frame
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: reading_frame
Initial definition captured.
Initial parent: SO:0001410
92e3cae