SO:0001149 - alternate_sequence

alternate_sequence_site

SO:0001149

Definition: Description of sequence variants produced by alternative splicing, alternative promoter usage, alternative initiation and ribosomal frameshifting.

Comments and references

Discrete.

Definition references: EBIBS:GAR, UniProt:curation_manual

Synonyms

Scope	Value
exact	alternative_sequence
exact	var_seq
narrow	isoform
narrow	sequence variation
narrow	varsplic

Identifiers and subsets

Accession: SO:0001149

Persistent URL: http://purl.obolibrary.org/obo/SO_0001149

Alternate IDs: BS:00073, SO:0001065

Subsets: biosapiens

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0001146 - polypeptide_variation_site

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2016-12-05	created	Term introduced into the editable ontology history Initial label: alternate_sequence_site Initial definition captured. Initial parent: SO:0001146	`92e3cae`