Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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translational_frameshift

SO:0001210

Definition: The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.

Comments and references

Added synonym 'ribosomal_slippage' on Feb 1, 2021, a term in INSDC and GenBank. See GitHub Issue #522.

Definition references: SO:ke, http://www.insdc.org/files/feature_table.html

Synonyms

ScopeValue
exactINSDC_qualifier:ribosomal_slippage
exactribosomal frameshift
exactribosomal slippage
exacttranslational frameshift

Identifiers and subsets

Accession: SO:0001210

Persistent URL: http://purl.obolibrary.org/obo/SO_0001210

Alternate IDs: None

Subsets: None

Cross references: http://en.wikipedia.org/wiki/Translational_frameshift

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2021-02-08 in commit 9fa74b8

Number of changes: 5

Ontology neighborhood diagram

Ontology neighborhood for SO:0001210 Ontology neighborhood graph for SO:0001210 translational_frameshift. Parent, child, and related nodes can be activated to open their term pages. SO:0000836 mRNA_region SO:0000836 mRNA_region SO:0001210 translational_frameshift SO:0001210 translational_frameshift SO:0001211 plus_1_translational_frameshift SO:0001211 plus_1_translational_frameshift SO:0001212 plus_2_translational_frameshift SO:0001212 plus_2_translational_frameshift SO:0002329 minus_1_translational_frameshift SO:0002329 minus_1_translational_frameshift SO:0002330 minus_2_translational_frameshift SO:0002330 minus_2_translational_frameshift
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2021-02-08editedTerm stanza touched in repository history9fa74b8
#526
2021-02-03synonym addedSynonym added: ribosomal slippage
Scope: exact
f84886e
#522
2021-02-03synonym addedSynonym added: INSDC_qualifier:ribosomal_slippage
Scope: exact
f84886e
#522
2021-02-03definition changedDefinition updated
Before: The region of mRNA (not divisible by 3 bases) that is skipped during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.
After: The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.
f84886e
#522
2016-12-05createdTerm introduced into the editable ontology history
Initial label: translational_frameshift
Initial definition captured.
Initial parent: SO:0000836
92e3cae