SO:0001590 - terminator_codon

terminator_codon_variant

SO:0001590

Definition: A sequence variant whereby at least one of the bases in the terminator codon is changed.

Comments and references

The terminal codon may be the terminator, or in an incomplete transcript the last available codon.

Definition references: SO:ke

Synonyms

Scope	Value
exact	VAT:endOverlap
exact	terminal codon variant
exact	terminal_codon_variant
exact	terminator codon variant

Identifiers and subsets

Accession: SO:0001590

Persistent URL: http://purl.obolibrary.org/obo/SO_0001590

Alternate IDs: SO:0001625

Subsets: None

Cross references: http://vat.gersteinlab.org/formats.php, loinc:LA6700-2

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

SO:0001580 - coding_sequence_variant

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

Date	Change	Summary	Evidence
2016-12-05	created	Term introduced into the editable ontology history Initial label: terminator_codon_variant Initial definition captured. Initial parent: SO:0001580	`92e3cae`