five_prime_sticky_end_restriction_enzyme_cleavage_site

SO:0001975

Definition: A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.

Comments and references

Requested by Jackie Quinn. The sticky restriction sites are different from junctions because they include the sequence that is cut, inclusive of the five prime junction and the three prime junction.

Definition references: SO:ke

Synonyms

ScopeValue
exactfive prime sticky end restriction enzyme cleavage site

Identifiers and subsets

Accession: SO:0001975

Persistent URL: http://purl.obolibrary.org/obo/SO_0001975

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2021-07-12 in commit 795c410

Number of changes: 2

Ontology neighborhood diagram

Ontology neighborhood for SO:0001975 Ontology neighborhood graph for SO:0001975 five_prime_sticky_end_restriction_enzyme_cleavage_site. Parent, child, and related nodes can be activated to open their term pages. SO:0001692 sticky_end_restriction_enzyme_cleavage_site SO:0001692 sticky_end_restriction_enzyme_cleavage_site SO:0001975 five_prime_sticky_end_restriction_enzyme_cleavage_site SO:0001975 five_prime_sticky_end_restriction_enzyme_cleavage_site
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2021-07-12editedTerm stanza touched in repository history795c410
2016-12-05createdTerm introduced into the editable ontology history
Initial label: five_prime_sticky_end_restriction_enzyme_cleavage_site
Initial definition captured.
Initial parent: SO:0001692
92e3cae