Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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sequence_alteration_artifact

SO:0002172

Definition: A sequence_alteration where the source of the alteration is due to an artifact in the base-calling or assembly process.

Synonyms

ScopeValue
exactsequence alteration artifact

Identifiers and subsets

Accession: SO:0002172

Persistent URL: http://purl.obolibrary.org/obo/SO_0002172

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2017-08-18 in commit 42b0e70

Most recent Git-era change: 2017-08-18 in commit 42b0e70

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0002172 Ontology neighborhood graph for SO:0002172 sequence_alteration_artifact. Parent, child, and related nodes can be activated to open their term pages. SO:0000413 sequence_difference SO:0000413 sequence_difference SO:0002172 sequence_alteration_artifact SO:0002172 sequence_alteration_artifact SO:0002173 indel_artifact SO:0002173 indel_artifact SO:0002176 substitution_artifact SO:0002176 substitution_artifact SO:0002174 deletion_artifact SO:0002174 deletion_artifact SO:0002175 insertion_artifact SO:0002175 insertion_artifact
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2017-08-18createdTerm introduced into the editable ontology history
Initial label: sequence_alteration_artifact
Initial definition captured.
Initial parent: SO:0000413
42b0e70