inert_DNA_spacer
SO:0002223
Definition: Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.
Comments and references
Updated by Evan Christensen on May 27, 2021 per github request https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/494
Definition references: PMID:20843779, PMID:24933158, PMID:27034378, PMID:28422998
Synonyms
| Scope | Value |
|---|---|
| related | Inert DNA Spacer |
Identifiers and subsets
Accession: SO:0002223
Persistent URL: http://purl.obolibrary.org/obo/SO_0002223
Alternate IDs: None
Subsets: None
Cross references: doi:10.1101/584664
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2019-09-06 in commit 569641f
Most recent Git-era change: 2023-02-13 in commit 56b4a2d
Number of changes: 5
Ontology neighborhood diagram
Relationships
Parents
Children
None recorded in the current release neighborhood.
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2023-02-13 | xref removed | Cross reference removed: BioRXiv:https\://doi.org/10.1101/584664 | 56b4a2d |
| 2023-02-13 | xref added | Cross reference added: doi:10.1101/584664 | 56b4a2d |
| 2021-05-27 | definition changed | Definition updated Before: Sequences that decrease regulatory interactions between a promoter, its 5' context and/or the translational unit(s) it regulated. Spacers can affect both translation and transcription. After: Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes. | 9f923ba |
| 2019-09-06 | label changed | Label changed from intert_DNA_spacer to inert_DNA_spacer Before: intert_DNA_spacer After: inert_DNA_spacer | 3dd384f |
| 2019-09-06 | created | Term introduced into the editable ontology history Initial label: intert_DNA_spacer Initial definition captured. Initial parent: SO:0005836 | 569641f |