BREu_motif
SO:0000016
Definition: A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements at -37 to -32 with respect to the TSS (+1). Consensus sequence is (G|C)(G|C)(G|A)CGCC. Binds TFIIB.
Comments and references
Binds TFIIB.
Definition references: PMID:12651739, PMID:16858867
Synonyms
| Scope | Value |
|---|---|
| exact | B-recognition element |
| exact | BRE motif |
| exact | BREu motif |
| exact | transcription factor B-recognition element |
| related | BREu |
| related | TFIIB recognition element |
Identifiers and subsets
Accession: SO:0000016
Persistent URL: http://purl.obolibrary.org/obo/SO_0000016
Alternate IDs: None
Subsets: None
Cross references: None
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2019-07-31 in commit ad4ec85
Number of changes: 2
Ontology neighborhood diagram
Relationships
Parents
Children
None recorded in the current release neighborhood.
http://purl.obolibrary.org/obo/so#part_of (outgoing)
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2019-07-31 | edited | Term stanza touched in repository history | ad4ec85 |
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: BREu_motif Initial definition captured. Initial parent: SO:0001660 | 92e3cae |