Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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core_eukaryotic_promoter_element

SO:0001660

Definition: An element that only exists within the promoter region of a eukaryotic gene.

Comments and references

Definition references: GREEKC:cl

Synonyms

ScopeValue
exactcore eukaryotic promoter element
relatedgeneral transcription factor binding site

Identifiers and subsets

Accession: SO:0001660

Persistent URL: http://purl.obolibrary.org/obo/SO_0001660

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2020-08-13 in commit 56fcc6a

Number of changes: 8

Ontology neighborhood diagram

Ontology neighborhood for SO:0001660 Ontology neighborhood graph for SO:0001660 core_eukaryotic_promoter_element. Parent, child, and related nodes can be activated to open their term pages. SO:0002309 core_promoter_element SO:0002309 core_promoter_element SO:0001660 core_eukaryotic_promoter_element SO:0001660 core_eukaryotic_promoter_element SO:0001677 intermediate_element SO:0001677 intermediate_element SO:0001901 AACCCT_box SO:0001901 AACCCT_box SO:0001162 MTE SO:0001162 MTE SO:0001959 TCT_motif SO:0001959 TCT_motif SO:0001664 DCE SO:0001664 DCE SO:0000619 A_box SO:0000619 A_box SO:0002221 eukaryotic_promoter SO:0002221 eukaryotic_promoter
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#part_of (outgoing)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2020-08-13synonym removedSynonym removed: core promoter element
Scope: exact
56fcc6a
2020-08-13parent removedParent removed: SO:000165956fcc6a
2020-08-13parent addedParent added: SO:000230956fcc6a
2020-08-13definition changedDefinition updated
Before: An element that only exists within the promoter region of a gene.
After: An element that only exists within the promoter region of a eukaryotic gene.
56fcc6a
2019-07-31synonym addedSynonym added: core eukaryotic promoter element
Scope: exact
ad4ec85
2019-07-31definition changedDefinition updated
Before: no definition recorded
After: An element that only exists within the promoter region of a gene.
ad4ec85
2019-07-31label changedLabel changed from core_promoter_element to core_eukaryotic_promoter_element
Before: core_promoter_element
After: core_eukaryotic_promoter_element
ad4ec85
2016-12-05createdTerm introduced into the editable ontology history
Initial label: core_promoter_element
Initial parent: SO:0001659
92e3cae