Sequence Ontology

A shared vocabulary for biological sequence features and annotations

Home / Current release / SO:0000173

GC_rich_promoter_region

SO:0000173

Definition: A conserved GC-rich region located upstream of the start point of eukaryotic transcription units which may occur in multiple copies or in either orientation; consensus=GGGCGG.

Comments and references

Definition references: http://www.insdc.org/files/feature_table.html

Synonyms

ScopeValue
exactGC rich promoter region
exactGC-rich region
exactINSDC_qualifier:GC_rich_promoter_region
broadINSDC_feature:regulatory

Identifiers and subsets

Accession: SO:0000173

Persistent URL: http://purl.obolibrary.org/obo/SO_0000173

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2020-07-01 in commit 2e01a41

Number of changes: 4

Ontology neighborhood diagram

Ontology neighborhood for SO:0000173 Ontology neighborhood graph for SO:0000173 GC_rich_promoter_region. Parent, child, and related nodes can be activated to open their term pages. SO:0001659 promoter_element SO:0001659 promoter_element SO:0000173 GC_rich_promoter_region SO:0000173 GC_rich_promoter_region SO:0000170 RNApol_II_promoter SO:0000170 RNApol_II_promoter
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

http://purl.obolibrary.org/obo/so#part_of (outgoing)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2020-07-01editedTerm stanza touched in repository history2e01a41
2018-01-26synonym addedSynonym added: INSDC_qualifier:GC_rich_promoter_region
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:regulatory
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: GC_rich_promoter_region
Initial definition captured.
Initial parent: SO:0001659
92e3cae