promoter_element
SO:0001659
Definition: An element that can exist within the promoter region of a gene.
Comments and references
Mmoved from is_a: SO:0001055 transcriptional_cis_regulatory_region as per request from GREEKC initiative in August 2020.
Synonyms
| Scope | Value |
|---|---|
| exact | promoter element |
Identifiers and subsets
Accession: SO:0001659
Persistent URL: http://purl.obolibrary.org/obo/SO_0001659
Alternate IDs: None
Subsets: None
Cross references: None
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2020-08-13 in commit 56fcc6a
Number of changes: 3
Ontology neighborhood diagram
Relationships
Parents
Children
- SO:0001164 - DPE1_motif
- SO:0001165 - DMv1_motif
- SO:0001161 - DMv2_motif
- SO:0001678 - regulatory_promoter_element
- SO:0001160 - DMv3_motif
- SO:0001850 - HSE
- SO:0002006 - zinc_repressed_element
- SO:0001168 - NDM3_motif
- SO:0001871 - PCB
- SO:0001167 - NDM2_motif
- SO:0001858 - TR_box
- SO:0001859 - STREP_motif
- SO:0001856 - CCAAT_motif
- SO:0001857 - Ace2_UAS
- SO:0001974 - CTCF_binding_site
- SO:0001855 - MCB
- SO:0001852 - mating_type_M_box
- SO:0002309 - core_promoter_element
- SO:0001839 - CSL_response_element
- SO:0002156 - CArG_box
- SO:0001159 - DMv5_motif
- SO:0000173 - GC_rich_promoter_region
- SO:0001157 - DMv4_motif
- SO:0001861 - sterol_regulatory_element
- SO:0001845 - DRE
- SO:0001846 - FLEX_element
- SO:0001843 - CRE
- SO:0001844 - CuRE
- SO:0001842 - AP_1_binding_site
- SO:0002216 - Pho7_binding_site
- SO:0001865 - CDRE_motif
- SO:0002044 - TCS_element
- SO:0002045 - pheromone_response_element
- SO:0001849 - homol_E_box
- SO:0001847 - forkhead_motif
http://purl.obolibrary.org/obo/so#overlaps (outgoing)
http://purl.obolibrary.org/obo/so#part_of (outgoing)
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2020-08-13 | edited | Term stanza touched in repository history | 56fcc6a |
| 2019-07-31 | definition changed | Definition updated Before: no definition recorded After: An element that can exist within the promoter region of a gene. | ad4ec85 |
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: promoter_element Initial parent: SO:0000713 | 92e3cae |