zinc_repressed_element

SO:0002006

Definition: A promoter element that has the consensus sequence GNMGATC, and is found in promoters of genes repressed in the presence of zinc.

Comments and references

This element is bound by Loz1 in S. pombe. The paper does not name the element. This term was requested by Midoris Harris, for Pombe.

Definition references: PMID:24003116, POMBE:mh

Synonyms

ScopeValue
exactzinc repressed element

Identifiers and subsets

Accession: SO:0002006

Persistent URL: http://purl.obolibrary.org/obo/SO_0002006

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0002006 Ontology neighborhood graph for SO:0002006 zinc_repressed_element. Parent, child, and related nodes can be activated to open their term pages. SO:0001659 promoter_element SO:0001659 promoter_element SO:0002006 zinc_repressed_element SO:0002006 zinc_repressed_element SO:0002225 LOZ1_response_element SO:0002225 LOZ1_response_element
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: zinc_repressed_element
Initial definition captured.
Initial parent: SO:0001659
92e3cae