DMv4_motif
SO:0001157
Definition: A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).
Comments and references
Definition references: PMID:16827941:12537576
Synonyms
| Scope | Value |
|---|---|
| exact | DMv4 |
| exact | DMv4 motif |
| exact | directional motif v4 |
| exact | motif 1 element |
| exact | promoter motif 1 |
| narrow | YGGTCACATR |
Identifiers and subsets
Accession: SO:0001157
Persistent URL: http://purl.obolibrary.org/obo/SO_0001157
Alternate IDs: None
Subsets: None
Cross references: None
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2016-12-05 in commit 92e3cae
Number of changes: 1
Ontology neighborhood diagram
Relationships
Parents
Children
None recorded in the current release neighborhood.
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: DMv4_motif Initial definition captured. Initial parent: SO:0001659 | 92e3cae |