CpG_island

SO:0000307

Definition: Regions of a few hundred to a few thousand bases in vertebrate genomes that are relatively GC and CpG rich; they are typically unmethylated and often found near the 5' ends of genes.

Comments and references

Definition references: SO:rd

Synonyms

ScopeValue
exactCG island
exactCpG island

Identifiers and subsets

Accession: SO:0000307

Persistent URL: http://purl.obolibrary.org/obo/SO_0000307

Alternate IDs: None

Subsets: SOFA

Cross references: http://en.wikipedia.org/wiki/CpG_island

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000307 Ontology neighborhood graph for SO:0000307 CpG_island. Parent, child, and related nodes can be activated to open their term pages. SO:0001411 biological_region SO:0001411 biological_region SO:0000307 CpG_island SO:0000307 CpG_island
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: CpG_island
Initial definition captured.
Initial parent: SO:0001411
92e3cae