biological_region
SO:0001411
Definition: A region defined by its disposition to be involved in a biological process.
Comments and references
Definition references: SO:cb
Synonyms
| Scope | Value |
|---|---|
| exact | INSDC_note:biological_region |
| exact | biological region |
| broad | INSDC_misc_feature |
Identifiers and subsets
Accession: SO:0001411
Persistent URL: http://purl.obolibrary.org/obo/SO_0001411
Alternate IDs: None
Subsets: SOFA
Cross references: None
History summary
Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.
First seen in Git-era editable history: 2016-12-05 in commit 92e3cae
Most recent Git-era change: 2018-01-26 in commit 5fe48bd
Number of changes: 3
Ontology neighborhood diagram
Relationships
Parents
Children
- SO:0000609 - oligo_U_tail
- SO:0000704 - gene
- SO:0000605 - intergenic_region
- SO:0000726 - repeat_unit
- SO:0001872 - rearrangement_region
- SO:0000336 - pseudogene
- SO:0000657 - repeat_region
- SO:0000771 - QTL
- SO:0000002 - sequence_secondary_structure
- SO:0001683 - sequence_motif
- SO:0001954 - restriction_enzyme_region
- SO:0000610 - polyA_sequence
- SO:1000002 - substitution
- SO:0002300 - unit_of_gene_expression
- SO:1001275 - retron
- SO:0000462 - pseudogenic_region
- SO:0000833 - transcript_region
- SO:0000104 - polypeptide
- SO:0005855 - gene_group
- SO:0000830 - chromosome_part
- SO:0000581 - cap
- SO:0000831 - gene_member_region
- SO:0001037 - mobile_genetic_element
- SO:0001645 - genetic_marker
- SO:0002259 - polyA_site_cluster
- SO:0000839 - polypeptide_region
- SO:0001747 - open_chromatin_region
- SO:0001985 - Okazaki_fragment
- SO:0000297 - D_loop
- SO:0000307 - CpG_island
- SO:0000667 - insertion
- SO:0000298 - recombination_feature
- SO:0002331 - accessible_DNA_region
- SO:0002357 - biosynthetic_gene_cluster
- SO:0000296 - origin_of_replication
- SO:1000036 - inversion
- SO:0000842 - gene_component_region
- SO:0000018 - linkage_group
- SO:0000159 - deletion
- SO:0002186 - mutational_hotspot
- SO:0000409 - binding_site
- SO:0001237 - amino_acid
- SO:0001235 - replicon
- SO:0001236 - base
Change history
This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.
| Date | Change | Summary | Evidence |
|---|---|---|---|
| 2018-01-26 | synonym added | Synonym added: INSDC_note:biological_region Scope: exact | 5fe48bd |
| 2018-01-26 | synonym added | Synonym added: INSDC_misc_feature Scope: broad | 5fe48bd |
| 2016-12-05 | created | Term introduced into the editable ontology history Initial label: biological_region Initial definition captured. Initial parent: SO:0000001 | 92e3cae |