rearrangement_region

SO:0001872

Definition: A region of a chromosome, where the chromosome has undergone a large structural rearrangement that altered the genome organization. There is no longer synteny to the reference genome.

Comments and references

NCBI definition: An orphan rearrangement between chromosomal location observed in isolation.

Definition references: NCBI:th, PMID:18564416

Synonyms

ScopeValue
exactrearrangement region

Identifiers and subsets

Accession: SO:0001872

Persistent URL: http://purl.obolibrary.org/obo/SO_0001872

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0001872 Ontology neighborhood graph for SO:0001872 rearrangement_region. Parent, child, and related nodes can be activated to open their term pages. SO:0001411 biological_region SO:0001411 biological_region SO:0001785 structural_alteration SO:0001785 structural_alteration SO:0001872 rearrangement_region SO:0001872 rearrangement_region
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: rearrangement_region
Initial definition captured.
Initial parents: SO:0001411, SO:0001785
92e3cae