Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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repeat_region

SO:0000657

Definition: A region of sequence containing one or more repeat units.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactINSDC_qualifier:other
exactrepeat region
broadINSDC_feature:repeat_region

Identifiers and subsets

Accession: SO:0000657

Persistent URL: http://purl.obolibrary.org/obo/SO_0000657

Alternate IDs: None

Subsets: SOFA

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 3

Ontology neighborhood diagram

Ontology neighborhood for SO:0000657 Ontology neighborhood graph for SO:0000657 repeat_region. Parent, child, and related nodes can be activated to open their term pages. SO:0001411 biological_region SO:0001411 biological_region SO:0000657 repeat_region SO:0000657 repeat_region SO:0000433 non_LTR_retrotransposon_polymeric_tract SO:0000433 non_LTR_retrotransposon_polymeric_tract SO:0000314 direct_repeat SO:0000314 direct_repeat SO:0000705 tandem_repeat SO:0000705 tandem_repeat SO:0000658 dispersed_repeat SO:0000658 dispersed_repeat SO:0002192 flanking_repeat SO:0002192 flanking_repeat SO:0001484 X_element_combinatorial_repeat SO:0001484 X_element_combinatorial_repeat SO:0000726 repeat_unit SO:0000726 repeat_unit
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#has_part (outgoing)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym addedSynonym added: INSDC_qualifier:other
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:repeat_region
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: repeat_region
Initial definition captured.
Initial parent: SO:0001411
92e3cae