Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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nested_repeat

SO:0001649

Definition: A repeat that is disrupted by the insertion of another element.

Comments and references

Definition references: SO:ke

Synonyms

ScopeValue
exactINSDC_qualifier:nested
exactnested repeat
broadINSDC_feature:repeat_region

Identifiers and subsets

Accession: SO:0001649

Persistent URL: http://purl.obolibrary.org/obo/SO_0001649

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 5

Ontology neighborhood diagram

Ontology neighborhood for SO:0001649 Ontology neighborhood graph for SO:0001649 nested_repeat. Parent, child, and related nodes can be activated to open their term pages. SO:0000657 repeat_region SO:0000657 repeat_region SO:0001649 nested_repeat SO:0001649 nested_repeat SO:0001658 nested_tandem_repeat SO:0001658 nested_tandem_repeat SO:0001050 repeat_fragment SO:0001050 repeat_fragment
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#part_of (incoming)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym removedSynonym removed: nested repeat
Scope: related
5fe48bd
2018-01-26synonym addedSynonym added: nested repeat
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_qualifier:nested
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:repeat_region
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: nested_repeat
Initial definition captured.
Initial parent: SO:0000657
92e3cae