Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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transcript_region

SO:0000833

Definition: A region of a transcript.

Comments and references

This term was added to provide a grouping term for the region parts of transcript, thus giving them an is_a path back to the root.

Definition references: SO:ke

Synonyms

ScopeValue
exacttranscript region

Identifiers and subsets

Accession: SO:0000833

Persistent URL: http://purl.obolibrary.org/obo/SO_0000833

Alternate IDs: None

Subsets: SOFA

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0000833 Ontology neighborhood graph for SO:0000833 transcript_region. Parent, child, and related nodes can be activated to open their term pages. SO:0001411 biological_region SO:0001411 biological_region SO:0000833 transcript_region SO:0000833 transcript_region SO:0000852 exon_region SO:0000852 exon_region SO:0000147 exon SO:0000147 exon SO:0001977 ribonuclease_site SO:0001977 ribonuclease_site SO:0000834 mature_transcript_region SO:0000834 mature_transcript_region SO:0000835 primary_transcript_region SO:0000835 primary_transcript_region SO:0000977 anchor_binding_site SO:0000977 anchor_binding_site SO:0000673 transcript SO:0000673 transcript
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#part_of (outgoing)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: transcript_region
Initial definition captured.
Initial parent: SO:0001411
92e3cae