TRIM

SO:0002261

Definition: TRIM elements have terminal direct repeat sequences of 100-250 bp in length that flank an internal domain of 100–300 bp. TRIMs lack coding domains and thus do not encode proteins.

Comments and references

Added as per GitHub Issue Request #429 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/429)

Definition references: PMID:11717436

Synonyms

ScopeValue
exactterminal-repeat retrotransposons in miniature
exactterminal-repeat_retrotransposons_in_miniature

Identifiers and subsets

Accession: SO:0002261

Persistent URL: http://purl.obolibrary.org/obo/SO_0002261

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2020-05-27 in commit d41b89f

Most recent Git-era change: 2020-05-27 in commit d41b89f

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:0002261 Ontology neighborhood graph for SO:0002261 TRIM. Parent, child, and related nodes can be activated to open their term pages. SO:0000186 LTR_retrotransposon SO:0000186 LTR_retrotransposon SO:0002261 TRIM SO:0002261 TRIM
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

None recorded in the current release neighborhood.

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2020-05-27createdTerm introduced into the editable ontology history
Initial label: TRIM
Initial definition captured.
Initial parent: SO:0000186
d41b89f
#429