stop_codon_signal

SO:1001288

Definition: A recoding stimulatory signal that is a stop codon and has effect on efficiency of recoding.

Comments and references

This term does not include the stop codons that are redefined. An example would be a stop codon that partially overlapped a frame shifting site would be an example stimulatory signal.

Definition references: PMID:12519954, SO:ke

Synonyms

ScopeValue
exactstop codon signal

Identifiers and subsets

Accession: SO:1001288

Persistent URL: http://purl.obolibrary.org/obo/SO_1001288

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2016-12-05 in commit 92e3cae

Number of changes: 1

Ontology neighborhood diagram

Ontology neighborhood for SO:1001288 Ontology neighborhood graph for SO:1001288 stop_codon_signal. Parent, child, and related nodes can be activated to open their term pages. SO:1001268 recoding_stimulatory_region SO:1001268 recoding_stimulatory_region SO:1001288 stop_codon_signal SO:1001288 stop_codon_signal SO:1001285 UGA_stop_codon_signal SO:1001285 UGA_stop_codon_signal SO:1001283 UAA_stop_codon_signal SO:1001283 UAA_stop_codon_signal SO:1001282 UAG_stop_codon_signal SO:1001282 UAG_stop_codon_signal
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2016-12-05createdTerm introduced into the editable ontology history
Initial label: stop_codon_signal
Initial definition captured.
Initial parent: SO:1001268
92e3cae