Sequence Ontology

A shared vocabulary for biological sequence features and annotations

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recoding_stimulatory_region

SO:1001268

Definition: A site in an mRNA sequence that stimulates the recoding of a region in the same mRNA.

Comments and references

Definition references: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=12519954&dopt=Abstract

Synonyms

ScopeValue
exactINSDC_qualifier:recoding_stimulatory_region
exactrecoding stimulatory region
exactrecoding stimulatory signal
broadINSDC_feature:regulatory

Identifiers and subsets

Accession: SO:1001268

Persistent URL: http://purl.obolibrary.org/obo/SO_1001268

Alternate IDs: None

Subsets: None

Cross references: None

History summary

Term history is reconstructed from the Git-era ontology files by comparing ontology classes across revisions. Earlier SVN-era changes will be added at a future date.

First seen in Git-era editable history: 2016-12-05 in commit 92e3cae

Most recent Git-era change: 2018-01-26 in commit 5fe48bd

Number of changes: 3

Ontology neighborhood diagram

Ontology neighborhood for SO:1001268 Ontology neighborhood graph for SO:1001268 recoding_stimulatory_region. Parent, child, and related nodes can be activated to open their term pages. SO:0000836 mRNA_region SO:0000836 mRNA_region SO:1001268 recoding_stimulatory_region SO:1001268 recoding_stimulatory_region SO:1001274 SECIS_element SO:1001274 SECIS_element SO:1001277 three_prime_recoding_site SO:1001277 three_prime_recoding_site SO:1001280 five_prime_recoding_site SO:1001280 five_prime_recoding_site SO:1001260 internal_Shine_Dalgarno_sequence SO:1001260 internal_Shine_Dalgarno_sequence SO:1001288 stop_codon_signal SO:1001288 stop_codon_signal SO:0000545 recoding_pseudoknot SO:0000545 recoding_pseudoknot
The local DAG shows nearby parent, child, and related terms. Each node links to its own term page.

Relationships

Parents

Children

http://purl.obolibrary.org/obo/so#part_of (incoming)

Change history

This timeline summarizes changes identified in SO’s GitHub commit history, including updates to labels, definitions, parent terms, synonyms, subsets, and obsoletion status. It is a best-effort reconstruction and may not include every change to a term. Since only history from GitHub is included at the moment, any term added before the migration from SVN to Git will show as being created in 2016. This will be addressed once SVN history is incorporated.

DateChangeSummaryEvidence
2018-01-26synonym addedSynonym added: INSDC_qualifier:recoding_stimulatory_region
Scope: exact
5fe48bd
2018-01-26synonym addedSynonym added: INSDC_feature:regulatory
Scope: broad
5fe48bd
2016-12-05createdTerm introduced into the editable ontology history
Initial label: recoding_stimulatory_region
Initial definition captured.
Initial parent: SO:0000836
92e3cae